Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs12034718 chr1:67379595 A/G 6.29E-5 285 8.17 25.57 26.1 KM Plot
KIRP rs12047897 chr1:28253307 C/T 1.23E-5 281 25.82 26.7 20.4 KM Plot
KIRP rs12052117 chr19:19485105 C/T 5.77E-5 287 24.8 27.1 8.98 KM Plot
KIRP rs12081714 chr1:15681021 A/G 1.22E-6 289 7.28 28.17 25.5 KM Plot
KIRP rs12125620 chr1:26552238 G/A 6.61E-5 286 25.93 27.75 13.17 KM Plot
KIRP rs12143085 chr1:205073842 A/G 7.2E-5 288 23.23 27.73 21.9 KM Plot
KIRP rs12146905 chr13:45036020 G/A 1.48E-11 285 26.18 23.63 6.17 KM Plot
KIRP rs12166549 chr22:42410419 T/C 0.000147 288 25.53 26.37 21.93 KM Plot
KIRP rs12173076 chr5:74697050 T/G 2.31E-5 284 25.82 26.28 12 KM Plot
KIRP rs12230486 chr12:116797029 T/C 0 283 25.93 21.93 4.07 KM Plot
KIRP rs12250362 chr10:74975381 C/G 8.77E-15 287 26.4 22.08 5.6 KM Plot
KIRP rs12261028 chr10:74973655 A/C 8.77E-15 287 26.4 22.08 5.6 KM Plot
KIRP rs12291804 chr11:77987074 T/C 9.0E-5 288 26.38 21.82 19.27 KM Plot
KIRP rs12354891 chr10:94818438 T/A 1.56E-9 279 26.1 23 9 KM Plot
KIRP rs12371905 chr12:116799946 A/G 0 284 26.37 20.4 4.07 KM Plot